Phillips, PatrickKasimatis, Katja2019-09-182019-09-182019-09-18https://hdl.handle.net/1794/24877Sexual reproduction is a fundamental process that structures populations and modulates interactions between species. The reproductive process is shaped by selection acting on the variance in mating success. Additionally, conflict between the sexes over the mechanisms by which mating success is optimized effects reproduction. Selection can also act in a sex-specific manner outside of the reproductive process and drive a different class of sexual antagonisms. To understand how sexual conflict shapes evolution within and between the sexes, the action of selection must be connected to the lifecycle of an individual. Such a lifecycle-explicit framework allows for quantitative measurements of sex-specific selection, sexual conflict, and genetic load. Here I connect the action of selection with the appropriate stage of the lifecycle to determine how conflict between the sexes contributes to genome evolution. Using theoretical approaches, I examine if sexually antagonistic viability selection can create genomic divergence between the sexes. I find that selection must be strong to generate measurable divergence, which produces a high genetic load. Additionally, I show that sampling variance can account for much of the signal attributed to sexually antagonistic selection in the literature. Using experimental approaches, I manipulate sex-specific selection acting during the gametic phase to determine the molecular components of male fertilization success. I develop Caenorhabditis nematodes as a new model system for studying post-insemination reproductive interactions. Contrary to expectation, I find that nematode sperm proteins are hyper-conserved at the sequence level and rapidly evolving at the gene family level. This result suggests an alternative signature of sex-specific selection and conflict. Additionally, I develop a genetic tool for isolating sperm dynamics. This sterility induction system is the first external, non-toxic, reversible sterility induction system in animals. Together my dissertation highlights how the genomic signatures of sexual selection and conflict are complex and require explicit empirical testing to validate both the phenotype and action of selection. Such complexity indicates that evolutionary systems biology approaches will be the most informative way to move the field forward and establish the importance of sexual conflict in shaping evolution. This work includes published and unpublished coauthored material.en-USAll Rights Reserved.CaenorhabditisPopulation GeneticsSexual ConflictSexual SelectionElectronic Thesis or Dissertation